stroke

Population: 206 papers with a page, 77 of them with their authors' code.

Friday, 18 September 2026 (1 paper)

[1] Code ↔ Paper doi:10.1093/braincomms/fcag279 [paper, repository]

Network flexibility facilitates treatment-induced recovery in post-stroke aphasia.

Journal: Brain communications

Authors' code: isaacfalconer/dfc_toolbox (MIT), OSF zja2b (no license)

Status: code verified, 80 files readable, 6 matches

Tuesday, 15 September 2026 (1 paper)

[2] doi:10.1212/wnl.0000000000218502 [paper]

Retinal Optical Coherence Tomography-Angiography and Longitudinal Changes in Cognition and Cerebral Small Vessel Disease.

Journal: Neurology

Status: code on request

Monday, 14 September 2026 (1 paper)

[3] doi:10.1080/19490976.2026.2726620 [paper, data]

Integrated metagenomic and metabolomic analysis identifies severity-specific inflammatory and metabolic signatures in post-stroke depression.

Journal: Gut microbes

Status: data only, 2 datasets cited

Sunday, 13 September 2026 (1 paper)

[4] doi:10.1113/jp290864 [paper, data]

Heart failure-induced reprogramming of salt-evoked neurovascular coupling in the rat hypothalamus.

Journal: The Journal of physiology

Status: data only, 1 dataset cited

Tuesday, 8 September 2026 (1 paper)

[5] doi:10.1162/imag.a.1340 [paper, data]

Biophysical simulations of fMRI responses using realistic microvascular models: Insights into distinct hemodynamics in humans and mice.

Journal: Imaging neuroscience (Cambridge, Mass.)

Status: data only, 1 dataset cited

Monday, 7 September 2026 (1 paper)

[6] doi:10.1186/s13062-026-00912-2 [paper, data]

Integrated analysis of single-cell transcriptome identifies a glial-neurovascular signaling trajectory in brain repair after ischemia.

Journal: Biology direct

Status: data only, 1 dataset cited

Saturday, 5 September 2026 (1 paper)

[7] Code ↔ Paper doi:10.3390/diagnostics16172861 [paper, repository]

Microstructural Changes in the Corpus Callosum in Different Forms of Sporadic Age-Related Cerebral Small Vessel Disease.

Journal: Diagnostics (Basel, Switzerland)

Authors' code: mikhail-matrosov/classibundler (no license)

Status: code verified, 15 files readable, 2 matches

Thursday, 3 September 2026 (2 papers)

[8] doi:10.3389/fneur.2026.1849021 [paper, data]

Early pharmacologic venous thromboembolism prophylaxis and in-hospital mortality in ICU patients with intracerebral hemorrhage: a landmark, propensity-weighted cohort study.

Journal: Frontiers in neurology

Status: code on request, 1 dataset cited

[9] doi:10.1002/advs.77547 [paper, data]

Nrsn1-Smarcc1 Coupling Regulates Neural Stem Cell Differentiation and Chronic-phase Recovery After Ischemic Stroke.

Journal: Advanced science (Weinheim, Baden-Wurttemberg, Germany)

Status: data only, 1 dataset cited

Tuesday, 1 September 2026 (4 papers)

[10] doi:10.1097/md.0000000000050324 [paper, data]

Transcriptomic integration reveals immune heterogeneity in vascular dementia and identifies ELF2 as a candidate therapeutic target.

Journal: Medicine

Status: data only, 1 dataset cited

[11] Code ↔ Paper doi:10.1002/alz.71822 [paper, repository]

SynthPET: A 3D generative AI approach for FDG-PET image synthesis from T1-weighted MRI and ASL CBF in Alzheimer's disease.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Authors' code: adni.loni.usc.edu/data-samples/access-data (no license)

Status: dead link

[12] doi:10.1002/alz.71811 [paper]

Female vulnerability to microvascular transport dysfunction emerges early across the Alzheimer's disease continuum.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Status: code on request

[13] doi:10.1093/brain/awag033 [paper, data]

Impairment of hippocampal gamma oscillations, mitochondria and neurovascular function in CADASIL.

Journal: Brain : a journal of neurology

Status: data only, 1 dataset cited

Friday, 28 August 2026 (1 paper)

[14] doi:10.1117/1.jbo.31.8.086007 [paper]

Time-resolved laser speckle contrast imaging (TR-LSCI) of cerebral blood flow response to intracranial pressure elevation.

Journal: Journal of biomedical optics

Status: code on request

Thursday, 27 August 2026 (1 paper)

[15] Code ↔ Paper doi:10.1212/wnl.0000000000218472 [paper, repository]

Lesion-Level Subtypes of White Matter Hyperintensity Evolution Beyond Spatial Location.

Journal: Neurology

Authors' code: rglezgz/WMH-subtypes (no license)

Status: code verified, 8 files readable, 9 matches

Wednesday, 26 August 2026 (2 papers)

[16] Code ↔ Paper doi:10.1093/braincomms/fcag322 [paper, repository]

Genomic insights into stroke recovery: cross-phenotype associations.

Journal: Brain communications

Authors' code: CMAldridge/Cross-Phenotype-GWAS (no license)

Status: code verified, 9 files readable, 3 matches

[17] doi:10.3389/fncel.2026.1908231 [paper, data]

Integrative transcriptomic- neuroimaging analysis reveals polygenic correlates of interhemispheric functional decoupling in ischemic stroke.

Journal: Frontiers in cellular neuroscience

Status: data only, 1 dataset cited

Saturday, 22 August 2026 (1 paper)

[18] doi:10.1038/s41598-026-66143-7 [paper, data]

Recombinant CXCL16 reduces brain injury by modulating microglial phenotype and attenuating apoptosis in acute ischemic stroke.

Journal: Scientific reports

Status: data only, 1 dataset cited

Friday, 21 August 2026 (1 paper)

[19] doi:10.3389/fmicb.2026.1907120 [paper, data]

Dual modulation of the NLRP3/CASPASE-1 inflammasome pathway and gut microbial metabolism: the antidepressant mechanism of puerarin.

Journal: Frontiers in microbiology

Status: data only, 1 dataset cited

Wednesday, 19 August 2026 (1 paper)

[20] Code ↔ Paper doi:10.3390/brainsci16080882 [paper, repository]

How Long Is the Brain Perfusable After Global Ischemia? A Systematic Review.

Journal: Brain sciences

Authors' code: andymckenzie/Ischemic_perfusion_review (no license)

Status: code verified, 2 files readable, 6 matches

Saturday, 15 August 2026 (1 paper)

[21] doi:10.1002/advs.77053 [paper, data]

Extracellular CIRP Dysregulates Microglial Efferocytosis in Acute Ischemic Stroke via the TLR4/miR-155/MafB Axis.

Journal: Advanced science (Weinheim, Baden-Wurttemberg, Germany)

Status: data only, 1 dataset cited

Friday, 14 August 2026 (1 paper)

[22] doi:10.3390/biomedicines14081829 [paper]

Transvenous Embolisation-Based Strategies for Brain Arteriovenous Malformations: Systematic Review and Meta-Analysis.

Journal: Biomedicines

Status: code on request

Thursday, 13 August 2026 (3 papers)

[23] doi:10.64898/2026.08.12.26360241 [paper, data]

Diffusion kurtosis imaging (gen)omics unravels mechanisms of cerebral small vessel disease

Journal: medRxiv (preprint)

Status: data only, 1 dataset cited

[24] Code ↔ Paper doi:10.1093/braincomms/fcag309 [paper, repository]

Neurovascular effects of tadalafil in patients with cerebral small vessel disease: ETLAS-2 substudy.

Journal: Brain communications

Authors' code: Zenodo 19233779 (CC-BY-4.0)

Status: code verified, 6 files readable, 6 matches

[25] Code ↔ Paper doi:10.1038/s41467-026-76812-w [paper, repository]

Assessing molecular, cellular and transcriptomic bases of laminar perfusion and cytoarchitecture coupling in the human cortex.

Journal: Nature communications

Authors' code: FanhuaGuo/ASL-Bigbrain-CCSI (MIT), Zenodo 21363179 (MIT)

Status: code verified, 70 files readable, 15 matches

Tuesday, 11 August 2026 (2 papers)

[26] Code ↔ Paper doi:10.1016/j.eclinm.2026.104143 [paper, repository]

Intensive versus standard blood pressure control and overall brain small vessel disease burden: a post-hoc analysis of the SPRINT randomized clinical trial.

Journal: EClinicalMedicine

Authors' code: UTHSCSA-NAL/SPRINT_SVD (no license)

Status: code verified, 2 files readable, 7 matches

[27] doi:10.3389/fimmu.2026.1700109 [paper]

Integrated machine learning and transcriptomics reveal immune infiltration-related orthologous transcription genes in cerebral ischemic injury.

Journal: Frontiers in immunology

Status: data only

Friday, 7 August 2026 (2 papers)

[28] Code ↔ Paper doi:10.1162/imag.a.1328 [paper, repository]

A robust and reproducible automated MRI pipeline for quantifying tissue outcomes after experimental stroke in multi-center preclinical networks.

Journal: Imaging neuroscience (Cambridge, Mass.)

Authors' code: cabeen/span-mri (other)

Status: code verified, 37 files readable, 13 matches

[29] doi:10.3390/s26165021 [paper]

Automatic Segmentation of Ischaemic Stroke Lesions Using Transformers and Convolutional Neural Networks Applied to Multimodal Neuroimaging.

Journal: Sensors (Basel, Switzerland)

Status: code on request

Wednesday, 5 August 2026 (2 papers)

[30] Code ↔ Paper doi:10.1080/20002297.2026.2705667 [paper, repository]

Oral microbiota dysbiosis related to the cortical thinning and cognitive impairment in cerebral small vessel disease.

Journal: Journal of oral microbiology

Authors' code: zhuozhizheng/Chinese_normative_reference_and_downstream_clinical_applications (no license)

Status: code verified, 29 files readable, 1 match

[31] Code ↔ Paper doi:10.1016/j.isci.2026.117108 [paper, repository]

PVT inhibition mitigates neuropathology and cognitive deficits in chronic cerebral hypoperfusion.

Journal: iScience

Authors' code: SunLab-code/WGCNA-CCH-iScience (no license)

Status: code verified, 2 files readable, 1 match

Monday, 3 August 2026 (4 papers)

[32] Code ↔ Paper doi:10.1371/journal.pcbi.1014576 [paper, repository]

A synthetic 3D human cerebrovascular model informed by histology for simulating the cortical depth-dependent BOLD fMRI signal.

Journal: PLoS computational biology

Authors' code: baezprecisionimaging-source/3dVAMOS (GPL-3.0)

Status: code verified, 1 file readable

[33] Code ↔ Paper doi:10.1038/s44161-026-00844-0 [paper, repository]

Pericyte K<sub>ATP</sub> channel hyperactivity redistributes cortical blood flow in a CADASIL mouse model.

Journal: Nature cardiovascular research

Authors' code: ntsoukias/SVD-Blood-Flow-Simulation (other), Zenodo 20722612 (CC-BY-4.0)

Status: code verified, 12 files readable, 5 matches

[34] doi:10.3389/fneur.2026.1879894 [paper]

Perivascular diffusion and white matter free water improve identification of cognitive impairment in cerebral small vessel disease.

Journal: Frontiers in neurology

Status: code on request

[35] Code ↔ Paper doi:10.3389/fbioe.2026.1824839 [paper, repository]

Synergy-based feedforward with minimal feedback control predicts walking over multiple cycles.

Journal: Frontiers in bioengineering and biotechnology

Authors' code: simtk.org (no license), simtk.org/projects/synergyfeedback (no license)

Status: code verified

Saturday, 1 August 2026 (8 papers)

[36] Code ↔ Paper doi:10.1002/nbm.70342 [paper, repository]

Task-Evoked Functional Activation and Coupling With CSF Flow Detected in the Human Brain With Ultrashort Echo Time fMRI at 7 T.

Journal: NMR in biomedicine

Authors' code: BrainInnovation/physiocorr (MIT)

Status: code verified, 5 files readable, 2 matches

[37] Code ↔ Paper doi:10.1002/cns.71114 [paper, repository]

Dynamic Functional Connectivity Changes in Cortical and Cortico-Striatal Strokes in Mice.

Journal: CNS neuroscience & therapeutics

Authors' code: Aswendt-Lab/AIDAmri (GPL-3.0), doi:10.12751/g-node.pmvtz1 (no license)

Status: code verified, 110 files readable, 5 matches

[38] doi:10.1002/brb3.71700 [paper, data]

Downregulation of Lgals3 Alleviates Inflammatory Response and Apoptosis in a Mouse Model of Cerebral Ischemia/Reperfusion Injury.

Journal: Brain and behavior

Status: data only, 1 dataset cited

[39] doi:10.1002/cns.71096 [paper]

Dynamic Hemispheric Lateralization of Naturalistic Emotional Processing After Unilateral Stroke: An EEG Study.

Journal: CNS neuroscience & therapeutics

Status: code on request

[40] Code ↔ Paper doi:10.1002/brb3.71667 [paper, repository]

Exploring Gray Matter Alterations in Post-Stroke Patients: A Structural Covariance Analysis.

Journal: Brain and behavior

Authors' code: JLhos-fmri/BrainCovarianceConnectToolkitV2.1 (GPL-3.0)

Status: code verified, 189 files readable

[41] doi:10.1002/cns.71080 [paper, data]

Vorinostat Mitigates Early Brain Injury Following Subarachnoid Hemorrhage Through Modulation of the C3aR1/TGF-β/Smad Pathway.

Journal: CNS neuroscience & therapeutics

Status: data only, 1 dataset cited

[42] doi:10.1002/cns.71074 [paper, data]

Bard1-Mediated Regulation of Hnrnpa2b1 Ubiquitination and Protein Stability Contributes to Neuronal Ferroptosis and Cognitive Dysfunction Following Ischemic Stroke.

Journal: CNS neuroscience & therapeutics

Status: data only, 1 dataset cited

[43] doi:10.1111/cbdd.70363 [paper]

Multi-Omics Integration Reveals That SN-011 Targets JUNB to Upregulate ADGRE5 and Restore Vascular Endothelial Cell Communication in Ischemic Stroke.

Journal: Chemical biology & drug design

Status: data only

Friday, 31 July 2026 (2 papers)

[44] doi:10.1126/sciadv.aeb3579 [paper, data]

Elevating cerebellar theta oscillations boosts noninvasively induced motor plasticity.

Journal: Science advances

Status: data only, 1 dataset cited

[45] doi:10.3389/fnins.2026.1881087 [paper, data]

Dual-graph attention autoencoder for spatial domain identification in ischemic stroke.

Journal: Frontiers in neuroscience

Status: data only, 1 dataset cited

Thursday, 30 July 2026 (3 papers)

[46] doi:10.1002/advs.202518421 [paper]

Modulation of miR-23b Wnt/β-catenin Axis Strengthens Endothelial Barrier Properties.

Journal: Advanced science (Weinheim, Baden-Wurttemberg, Germany)

Status: data only

[47] doi:10.1038/s41597-026-07787-y [paper, data]

A multi-paradigm and longitudinal EEG dataset including the "sixth-finger" and "affected-hand" motor imagery of stroke patients.

Journal: Scientific data

Status: data only, 1 dataset cited

[48] doi:10.3390/brainsci16080811 [paper]

Single-Cell Analysis of Brain Arteriovenous Malformations Reveals Pro-Angiogenic Myeloid Programs.

Journal: Brain sciences

Status: code on request

Wednesday, 29 July 2026 (1 paper)

[49] doi:10.1016/j.neurot.2026.e00977 [paper, data]

Exosome-mediated delivery of 3-n-butylphthalide rescues microglial energy crisis and ameliorates neuroinflammation in ischemic stroke.

Journal: Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics

Status: data only, 1 dataset cited

Friday, 24 July 2026 (1 paper)

[50] doi:10.1016/j.omtn.2026.103037 [paper]

PIWIL2 drives stroke progression via modulation of NF-κB signaling.

Journal: Molecular therapy. Nucleic acids

Status: code on request

Thursday, 23 July 2026 (1 paper)

[51] doi:10.1016/j.xpro.2026.104716 [paper]

Protocol for studying Chemerin 15-enhanced microglial phagocytosis in cerebral ischemia-reperfusion injury via the ChemR23/p38 MAPK pathway.

Journal: STAR protocols

Status: code on request

Wednesday, 22 July 2026 (2 papers)

[52] doi:10.1007/s12975-026-01471-4 [paper]

Loss of Vascular TMEM16A Impairs Cerebral Autoregulation and Exacerbates Ischemia-reperfusion Injury.

Journal: Translational stroke research

Status: code on request

[53] Code ↔ Paper doi:10.1038/s41593-026-02358-1 [paper, repository]

Cerebral venous blood flow regulates intracerebral pressure and brain clearance via meningeal lymphatic vessels.

Journal: Nature neuroscience

Authors' code: Zenodo 17453925 (no license)

Status: code verified, 1 file readable

Tuesday, 21 July 2026 (2 papers)

[54] doi:10.1159/000553643 [paper, data]

Pharyngeal Electrical Stimulation versus None for Post-Stroke Dysphagia: Rationale, Design, and Protocol for the Parallel Group Superiority Pharyngeal Electrical Stimulation for Acute Stroke Dysphagia Trial (PhEAST) (ISRCTN98886991).

Journal: Cerebrovascular diseases extra

Status: data only, 1 dataset cited

[55] doi:10.1016/j.omtn.2026.103028 [paper]

Intranasal Tat-modified PEG-PCL nanomicelles delivering anti-RelA siRNA attenuate ischemia-reperfusion injury.

Journal: Molecular therapy. Nucleic acids

Status: code on request

Monday, 20 July 2026 (1 paper)

[56] doi:10.1159/000553651 [paper, data]

Covert Embolic Brain Infarcts, Remote Cortical Thinning, and Cognitive Impairment in Atrial Fibrillation: An Analysis of the Swiss-AF Cohort.

Journal: Cerebrovascular diseases (Basel, Switzerland)

Status: data only, 1 dataset cited

Saturday, 18 July 2026 (2 papers)

[57] Code ↔ Paper doi:10.1002/mrm.70514 [paper, repository]

Brain Clearance of Contrast Agent in Intravenous DCE-MRI Is Measurable and Cannot Be Explained by Clearance Across the BBB Alone.

Journal: Magnetic resonance in medicine

Authors' code: nimo-group/DCE-MRI-brain-clearance-2025 (no license)

Status: code verified, 6 files readable, 2 matches

[58] doi:10.3390/brainsci16070757 [paper, data]

Low-Intensity Focused Ultrasound Alters Alzheimer's Disease Pathology, In Vivo, as a Function of Ultrasound Dose and Age.

Journal: Brain sciences

Status: data only, 1 dataset cited

Friday, 17 July 2026 (1 paper)

[59] doi:10.1016/j.xcrm.2026.102925 [paper]

Spinal cord stimulation modulates post-synaptic inhibition to improve arm neuromotor control after chronic stroke.

Journal: Cell reports. Medicine

Status: code on request

Thursday, 16 July 2026 (1 paper)

[60] doi:10.3389/fmolb.2026.1844734 [paper, data]

Discovery and validation of programmed cell death-associated key biomarker genes in ischemic stroke via ssGSEA/WGCNA and LASSO-SVM-RFE.

Journal: Frontiers in molecular biosciences

Status: code on request, 1 dataset cited

Wednesday, 15 July 2026 (1 paper)

[61] Code ↔ Paper doi:10.1177/0271678x261471282 [paper, repository]

Single-cell analysis of microglia and monocyte dynamics uncovers distinct TNF-driven neuroimmune signatures in humans after intracerebral hemorrhage.

Journal: Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism

Authors' code: lucascamillomd/brain-hematoma (no license)

Status: dead link

Tuesday, 14 July 2026 (1 paper)

[62] Code ↔ Paper doi:10.1002/advs.202515913 [paper, repository]

Intravital Multimodal Imaging of Human Cortical Organoid Transplantation in a Mouse Model of Chronic Stroke.

Journal: Advanced science (Weinheim, Baden-Wurttemberg, Germany)

Authors' code: liangy10/MIPOT (no license)

Status: empty repository, 1 file readable

Monday, 13 July 2026 (1 paper)

[63] doi:10.3389/ebm.2026.10948 [paper, data]

Genetic evidence for causal relationships between brain functional networks and domain-specific recovery after nondisabling ischemic stroke.

Journal: Experimental biology and medicine (Maywood, N.J.)

Status: data only, 1 dataset cited

Sunday, 12 July 2026 (2 papers)

[64] Code ↔ Paper doi:10.1007/s00221-026-07354-2 [paper, repository]

Transcutaneous auricular vagus nerve stimulation during a 3-back task: a high-density functional near-infrared spectroscopy study.

Journal: Experimental brain research

Authors' code: DOT-HUB/DOT-HUB (no license)

Status: dead link

[65] doi:10.1002/ccr3.73142 [paper]

Methotrexate-Induced Drug Hypersensitivity Syndrome Presenting With Acute Cerebral Infarction in End-Stage Renal Disease: A Case Report.

Journal: Clinical case reports

Status: code on request

Friday, 10 July 2026 (3 papers)

[66] Code ↔ Paper doi:10.1007/s12021-026-09798-x [paper, repository]

A Replicable NeuroMark Template for Whole-Brain SPECT Reveals Data-Driven Perfusion Networks and Their Alterations in Schizophrenia.

Journal: Neuroinformatics

Authors' code: esalman/autolabeller (other), trendscenter/gift-bids (CC-BY-4.0)

Status: code verified, 106 files readable, 1 match

[67] doi:10.1128/msystems.00149-26 [paper, data]

Effects of gut microbiota on the susceptibility of ischemic stroke in mice.

Journal: mSystems

Status: data only, 2 datasets cited

[68] doi:10.2147/jir.s605715 [paper, data]

Comparative Analysis of Ferroptosis- and Mitochondria-Related Genes in Ischemic Stroke via Bioinformatics Analysis and Experimental Validation.

Journal: Journal of inflammation research

Status: data only, 1 dataset cited

Thursday, 9 July 2026 (2 papers)

[69] Code ↔ Paper doi:10.1016/j.clinsp.2026.101034 [paper, repository]

Radial extracorporeal shock wave therapy improves upper limb function in chronic stroke patients: a randomized sham-controlled trial.

Journal: Clinics (Sao Paulo, Brazil)

Authors' code: doi:10.7910/dvn/1kq3ge (no license)

Status: code found, not verified yet

[70] doi:10.3389/fneur.2026.1794851 [paper, data]

Mitochondrial protein alterations in vascular dementia: evidence from Mendelian randomization, transcriptomics, and a chronic hypoperfusion model.

Journal: Frontiers in neurology

Status: data only, 1 dataset cited

Wednesday, 8 July 2026 (1 paper)

[71] doi:10.1117/1.nph.13.3.035002 [paper]

Disrupted functional connectivity during stroke recovery revealed via bedside optical neuroimaging.

Journal: Neurophotonics

Status: code on request

Tuesday, 7 July 2026 (3 papers)

[72] doi:10.1038/s41421-026-00899-0 [paper, data]

Sympathetic nervous system-mediated fibro-adipogenic progenitor mobilization drives stroke-related sarcopenia.

Journal: Cell discovery

Status: data only, 1 dataset cited

[73] doi:10.1117/1.nph.13.3.035003 [paper, data]

Intraoperative tracking of tissue perfusion during cerebral aneurysm surgery with laser speckle contrast imaging: insights beyond standard intraoperative neuromonitoring for detecting ischemia.

Journal: Neurophotonics

Status: data only, 1 dataset cited

[74] Code ↔ Paper doi:10.1093/braincomms/fcag261 [paper, repository]

Cortical speech envelope tracking reflects lesion-symptom profiles in post-stroke aphasia.

Journal: Brain communications

Authors' code: OSF hqs2e (no license)

Status: code verified, 2 files readable, 2 matches

Monday, 6 July 2026 (2 papers)

[75] Code ↔ Paper doi:10.1016/j.ebiom.2026.106367 [paper, repository]

Linking maternal blood pressure with fetal cerebral haemodynamics and cortical growth in congenital heart disease.

Journal: EBioMedicine

Authors' code: FNNDSC (no license)

Status: code verified

[76] doi:10.1177/0271678x261468891 [paper, data]

Endothelial estrogen receptor alpha (ESR1) regulates cerebral cavernous malformation pathogenesis via MEKK3-KLF signaling pathway.

Journal: Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism

Status: data only, 1 dataset cited

Saturday, 4 July 2026 (1 paper)

[77] Code ↔ Paper doi:10.1038/s41467-026-74957-2 [paper, repository]

Joint trajectories of brain atrophy, white matter hyperintensities and cognition quantify brain maintenance.

Journal: Nature communications

Authors' code: neuroprognosis/brain-maintenance-lgcm (GPL-3.0)

Status: code verified, 13 files readable, 1 match

Friday, 3 July 2026 (2 papers)

[78] doi:10.1161/jaha.125.047556 [paper]

Evaluating and Mitigating Carbon Dioxide Equivalent Emissions in Stroke Management: A Modeling Study.

Journal: Journal of the American Heart Association

Status: code on request

[79] Code ↔ Paper doi:10.1126/sciadv.adx5109 [paper, repository]

Substance P regulates Tacr1 neurons, which control nitric oxide-mediated neurovascular coupling in the mouse cortex.

Journal: Science advances

Authors' code: Zenodo 10656014 (CC-BY-4.0), neuroimlabpitt/tacr1-paper2024_functions (no license)

Status: code verified, 298 files readable

Thursday, 2 July 2026 (2 papers)

[80] Code ↔ Paper doi:10.1038/s12276-026-01764-6 [paper, repository]

Oligodendrocyte prosaposin restores subarachnoid haemorrhage-induced consciousness impairment.

Journal: Experimental & molecular medicine

Authors' code: Zenodo 15275572 (no license)

Status: dead link

[81] doi:10.1186/s13063-026-09866-2 [paper]

Efficacy of transcranial direct current stimulation for post-stroke urinary incontinence: study protocol for a randomized controlled trial.

Journal: Trials

Status: code on request

Wednesday, 1 July 2026 (3 papers)

[82] Code ↔ Paper doi:10.64898/2026.06.23.26355958 [paper, repository]

Motor imagery interventions in stroke patients modulate their brain-heart network dynamics

Journal: medRxiv (preprint)

Authors' code: minepy (no license)

Status: code verified

[83] Code ↔ Paper doi:10.1002/hbm.70602 [paper, repository]

Neuroimaging Correlates of Post-Stroke Pain After Ischemic Stroke: Secondary Analysis of the INSPiRE-TMS Trial.

Journal: Human brain mapping

Authors' code: netstim/leaddbs (GPL-3.0)

Status: code verified, 2,000 files readable, 7 matches

[84] Code ↔ Paper doi:10.1111/ejn.70604 [paper, repository]

The Role of the Glutamate-Glutamine Cycle in Synaptic Transmission During Ischemia and Recovery.

Journal: The European journal of neuroscience

Authors' code: HannahvanSusteren3/GGsyntrans (no license)

Status: code verified, 7 files readable, 6 matches

Monday, 29 June 2026 (2 papers)

[85] Code ↔ Paper doi:10.1136/svn-2025-004471 [paper, repository]

Characteristics of brain structural damage related to cerebral small vessel disease in general population with intracranial artery stenosis.

Journal: Stroke and vascular neurology

Authors' code: anniepan-pumc/TBSS-ICAS (MIT)

Status: code verified, 7 files readable, 2 matches

[86] doi:10.1186/s13020-026-01446-5 [paper, data]

The IL-17A modulating astrocytic activity was associated with the electroacupuncture-mediated improvement of sensorimotor ability after stroke.

Journal: Chinese medicine

Status: data only, 4 datasets cited

Saturday, 27 June 2026 (2 papers)

[87] doi:10.1186/s12866-026-05351-7 [paper, data]

Integrated analysis of gut microbiota, serum metabolomics, and proteomics reveals novel associations with clinical symptoms in patients with cerebral infarction.

Journal: BMC microbiology

Status: data only, 1 dataset cited

[88] doi:10.1038/s41419-026-09062-9 [paper]

Knockdown of endothelial Serpine1 improves stroke recovery by attenuating peri-infarct blood flow and blood-brain barrier disruption.

Journal: Cell death & disease

Status: code on request

Friday, 26 June 2026 (1 paper)

[89] doi:10.1038/s41386-026-02471-6 [paper]

Investigating the effect of increased dopamine signaling on cerebral blood flow in Major Depressive Disorder: a double-blind randomized placebo-controlled study.

Journal: Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology

Status: code on request

Thursday, 25 June 2026 (2 papers)

[90] Code ↔ Paper doi:10.1007/s10439-026-04209-3 [paper, repository]

Enhancement of Cerebral Oxygenation by Lower-Limb Neuromuscular Electrical Stimulation in Stroke Survivors.

Journal: Annals of biomedical engineering

Authors' code: Siagnos/CV-Model-NMES (no license)

Status: code verified, 6 files readable, 4 matches

[91] doi:10.3390/pathophysiology33030043 [paper, data]

A Differentiated SH-SY5Y Model of Hypoxic-Ischaemic Injury Reveals Dynamic Transcriptomic Responses During Reoxygenation.

Journal: Pathophysiology : the official journal of the International Society for Pathophysiology

Status: data only, 1 dataset cited

Wednesday, 24 June 2026 (2 papers)

[92] Code ↔ Paper doi:10.1186/s12916-026-05014-4 [paper, repository]

Targeting the posterior thalamic hub: hemispheric-specific encoding of pain-depression comorbidity after hemorrhagic stroke.

Journal: BMC medicine

Authors' code: demianw/tract_querier (BSD-3-Clause)

Status: code verified, 39 files readable

[93] Code ↔ Paper doi:10.1016/j.ynirp.2026.100365 [paper, repository]

Analysis of acute stroke-like lesions in MELAS: Distribution, potential boundaries and spreading pattern.

Journal: Neuroimage. Reports

Authors' code: Marius1311/Non-negative-ICA (BSD-3-Clause), DlutMedimgGroup/Chinese-Brain-PET-Template (MIT)

Status: code verified, 15 files readable

Tuesday, 23 June 2026 (1 paper)

[94] Code ↔ Paper doi:10.1161/jaha.125.046088 [paper, repository]

Systematic Identification of Therapeutic Targets and Repurposed Drugs for Stroke: From Genome Causal Analysis to Multilevel Validation.

Journal: Journal of the American Heart Association

Authors' code: AzumitoAsneuet112358/MR-Target-in-STROKE (no license)

Status: dead link

Monday, 22 June 2026 (1 paper)

[95] doi:10.1038/s41419-026-09021-4 [paper, data]

ACLY alleviates cerebral ischemia/reperfusion injury by reducing oxidative stress and enhancing mitochondrial function via histone acetylation.

Journal: Cell death & disease

Status: data only, 1 dataset cited

Saturday, 20 June 2026 (4 papers)

[96] doi:10.1038/s41598-026-54533-w [paper, data]

Hyperlipidemia induces hippocampal inflammation and loss of vascularity and can be rescued by silencing RIPK1.

Journal: Scientific reports

Status: data only, 1 dataset cited

[97] doi:10.1186/s12929-026-01271-w [paper, data]

Lack of cortistatin drives neuroimmune and vascular dysfunction in brain ischemia.

Journal: Journal of biomedical science

Status: data only, 11 datasets cited

[98] doi:10.1016/j.ajcnut.2026.101401 [paper]

Brain and physiological responses to flavored waters with different sweeteners: a randomized crossover study in healthy young adults.

Journal: The American journal of clinical nutrition

Status: code on request

[99] doi:10.1038/s41598-026-59183-6 [paper, data]

Neuron-specific expression of transmembrane protein 130 (TMEM130).

Journal: Scientific reports

Status: data only, 1 dataset cited

Friday, 19 June 2026 (1 paper)

[100] doi:10.1186/s12883-026-05065-3 [paper, data]

Artificial intelligence (AI)-powered diagnostic support for stroke via Telegram bot: preliminary findings.

Journal: BMC neurology

Status: data only, 2 datasets cited

Thursday, 18 June 2026 (2 papers)

[101] doi:10.1161/strokeaha.126.055551 [paper, data]

Ratio of Left Atrial and Ventricular Volume as New Marker of Atrial Cardiopathy and Stroke Risk.

Journal: Stroke

Status: data only, 2 datasets cited

[102] Code ↔ Paper doi:10.1038/s41598-026-55903-0 [paper, repository]

Towards trustworthy brain stroke diagnosis using a lightweight explainable deep learning framework for CT imaging.

Journal: Scientific reports

Authors' code: romzanalom/Explainable_AI_Deep_Neural_Brain_Stroke_Detection_DNBSD (no license)

Status: dead link

Wednesday, 17 June 2026 (1 paper)

[103] Code ↔ Paper doi:10.1080/07853890.2026.2685416 [paper, repository]

Pulmonary and cerebral damage in COVID-19 survivors: is there any association?

Journal: Annals of medicine

Authors' code: JoHof/lungmask (Apache-2.0), antonioguj/bronchinet (MIT), FAIR-Unipd/dsc-mri-toolbox (MIT)

Status: code verified, 140 files readable, 2 matches

Tuesday, 16 June 2026 (1 paper)

[104] doi:10.3389/fnins.2026.1848128 [paper, data]

Assessment of tenecteplase target-associated pathogenic mechanisms underlying depression in acute ischemic stroke patients: insights from artificial intelligence-driven multi-omics analysis and <i>in vitro</i> validation.

Journal: Frontiers in neuroscience

Status: data only, 1 dataset cited

Monday, 15 June 2026 (2 papers)

[105] doi:10.1038/s41598-026-56922-7 [paper]

First-principles multiscale modeling of cerebral hemodynamics enables personalized predictions of human brain temperature.

Journal: Scientific reports

Status: code on request

[106] Code ↔ Paper doi:10.1186/s12974-026-03885-1 [paper, repository]

Shared transcriptomic signatures in perilesional and contralesional cortex after ischemic stroke.

Journal: Journal of neuroinflammation

Authors' code: Zenodo 14750099 (CC-BY-4.0)

Status: code verified, 99 files readable

Friday, 12 June 2026 (2 papers)

[107] doi:10.1186/s12984-026-02048-w [paper, data]

Functional reorganization of the contralesional precentral gyrus following acute subcortical ischemic stroke and its association with gene expression profile.

Journal: Journal of neuroengineering and rehabilitation

Status: data only, 1 dataset cited

[108] doi:10.3389/fimmu.2026.1837728 [paper]

Hexokinase 2 upregulation is associated with glycolytic reprogramming and neuroinflammation in hypoxic-ischemic brain damage: a therapeutic target for early intervention.

Journal: Frontiers in immunology

Status: data only

Wednesday, 10 June 2026 (3 papers)

[109] Code ↔ Paper doi:10.1161/jaha.125.046172 [paper, repository]

Cardiovascular Disease Subtypes and Alzheimer's Disease: Phenotypic and Genetic Associations in the UK Biobank and All of Us Research Program.

Journal: Journal of the American Heart Association

Authors' code: MIILab-MTU/CVDSubtypesADCorrelation (no license)

Status: code verified, 10 files readable, 8 matches

[110] doi:10.1186/s13073-026-01687-x [paper, data]

Infiltrating monocyte-derived macrophages does not survive long term in stroke brain despite their dominance in the acute ischemic core and myeloid derived IGF-1 play dichotomous roles in stroke recovery.

Journal: Genome medicine

Status: data only, 1 dataset cited

[111] Code ↔ Paper doi:10.7759/cureus.110620 [paper, repository]

Top-Cited Articles on Dysphagia and Cognitive Impairment: A Scopus-Based Bibliometric Analysis of Publications Retrieved Through October 2025.

Journal: Cureus

Authors' code: taynaud/python-louvain (BSD-3-Clause)

Status: code verified, 8 files readable

Tuesday, 9 June 2026 (3 papers)

[112] doi:10.1186/s40814-026-01854-2 [paper, data]

Continuity Therapy for couples living with acquired brain injury: a non-randomised uncontrolled feasibility study.

Journal: Pilot and feasibility studies

Status: data only, 1 dataset cited

[113] Code ↔ Paper doi:10.1038/s41467-026-73518-x [paper, repository]

Scg2 drives corticospinal circuit reorganization with spinal premotor interneurons and astrocytes for motor recovery after stroke in mice.

Journal: Nature communications

Authors' code: Zenodo 18042248 (MIT)

Status: code verified, 1 file readable

[114] Code ↔ Paper doi:10.1186/s12974-026-03897-x [paper, repository]

Ischemic injury triggers a protective microglial phenotype in models of Aβ pathology.

Journal: Journal of neuroinflammation

Authors' code: KJPMolgenLab/scSeq_Hefendehl (no license), gitlab.mpcdf.mpg.de/mpibr/scic/roioverstack (no license)

Status: code verified, 38 files readable, 3 matches

Monday, 8 June 2026 (4 papers)

[115] doi:10.1073/pnas.2523612123 [paper, data]

A pericyte chloride clamp mechanism governs capillary control of cerebral blood flow.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Status: data only, 1 dataset cited

[116] doi:10.1038/s41467-026-73995-0 [paper, data]

Anisodine hydrobromide targets matk and prevents delayed rtPA thrombolysis-induced vasogenic cerebral edema in ischemic stroke.

Journal: Nature communications

Status: data only, 4 datasets cited

[117] doi:10.1038/s41598-026-57238-2 [paper]

Cardiac biomarkers combined with neuroimaging localization predict long-term outcomes in acute stroke patients.

Journal: Scientific reports

Status: code on request

[118] doi:10.1016/j.redox.2026.104253 [paper]

Ursodeoxycholic acid mitigates cerebral ischemia/reperfusion injury by inhibiting thrombin-induced lipid peroxidation through activation of ALDH3A1.

Journal: Redox biology

Status: data only

Friday, 5 June 2026 (1 paper)

[119] doi:10.1007/s12035-026-05965-y [paper, data]

Microglia Attenuate Neuroinflammation After Subarachnoid Hemorrhage by Modulating Astrocyte Phenotypic Transformation via the RARα/Mafb/Msr1 Pathway.

Journal: Molecular neurobiology

Status: data only, 1 dataset cited

Thursday, 4 June 2026 (4 papers)

[120] Code ↔ Paper doi:10.64898/2026.06.03.26354793 [paper, repository]

Bayesian networks to estimate prognosis in vascular cognitive impairment and small vessel disease: integrated analyses of interdependent contributors to multiple outcomes

Journal: medRxiv (preprint)

Authors' code: umcu/vci-bayes (MIT)

Status: code verified, 22 files readable, 1 match

[121] Code ↔ Paper doi:10.1371/journal.pone.0350637 [paper, repository]

Deep learning-based arterial waveform analysis for predicting postoperative cerebrovascular events in pediatric patients with Moyamoya disease.

Journal: PloS one

Authors' code: Medical-Vision-Lab/Aline_analysis (no license)

Status: dead link

[122] Code ↔ Paper doi:10.1038/s41598-026-53829-1 [paper, repository]

Attention U-Net with differential privacy in federated learning framework for brain stroke lesion segmentation.

Journal: Scientific reports

Authors' code: adhisivasys1984/fl-attentionunet-dp (no license)

Status: dead link

[123] doi:10.1016/j.isci.2026.116257 [paper, data]

Decoding neuron-specific lineage to identify diagnostic biomarkers and therapeutic targets for ischemic stroke.

Journal: iScience

Status: code on request, 1 dataset cited

Tuesday, 2 June 2026 (1 paper)

[124] doi:10.3390/diagnostics16111705 [paper, data]

Cross-Dataset Generalization of Deep Learning-Based Detectors for Intracranial Hemorrhage Subtype Localization on Noncontrast Head CT: A Comparative Study.

Journal: Diagnostics (Basel, Switzerland)

Status: data only, 1 dataset cited

Monday, 1 June 2026 (4 papers)

[125] Code ↔ Paper doi:10.1002/alz.71530 [paper, repository]

Differential associations of plasma biomarkers with Alzheimer's disease and small vessel disease: A multimodal imaging study.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Authors' code: miac-research/MARS-WMH (other)

Status: code verified, 9 files readable

[126] doi:10.1016/j.isci.2026.116134 [paper]

A role for nucleolin in functional improvement in stroke.

Journal: iScience

Status: code on request

[127] Code ↔ Paper doi:10.1111/ene.70678 [paper, repository]

Who Falls After a Stroke? Evidence From a Prospective Stroke Cohort.

Journal: European journal of neurology

Authors' code: netstim/leaddbs (GPL-3.0), dorianps/LESYMAP (Apache-2.0)

Status: code verified, 2,040 files readable, 2 matches

[128] Code ↔ Paper doi:10.11817/j.issn.1672-7347.2026.260137 [paper, repository]

Life<b>'</b>s Essential 10 and brain health: A prospective cohort study.

Journal: Zhong nan da xue xue bao. Yi xue ban = Journal of Central South University. Medical sciences

Authors' code: YSDun/LE10- (no license)

Status: dead link

Friday, 29 May 2026 (1 paper)

[129] doi:10.3390/ijms27114920 [paper, data]

Timing-Dependent Effects of Dexamethasone in a Mouse Model of Neonatal Hypoxic-Ischemic Brain Injury: A Transcriptomic Analysis of Synaptic Signaling and Calcium Homeostasis.

Journal: International journal of molecular sciences

Status: data only, 1 dataset cited

Thursday, 28 May 2026 (1 paper)

[130] doi:10.1007/s43440-026-00866-2 [paper, data]

Selective non-nuclear estrogen receptor activation with PaPE-1 evokes neuroprotection involving mTOR/MEK in an in vitro model of hypoxic/ischemic injury.

Journal: Pharmacological reports : PR

Status: data only, 1 dataset cited

Wednesday, 27 May 2026 (1 paper)

[131] Code ↔ Paper doi:10.1038/s41746-026-02803-2 [paper, repository]

A clinical neuroimaging platform for rapid, automated lesion detection and personalized post-stroke outcome prediction.

Journal: NPJ digital medicine

Authors' code: Zenodo 15626633 (CC-BY-4.0), Zenodo 15610144 (GPL-3.0), jcgriffis/ibb_toolkit (GPL-3.0)

Status: code verified, 359 files readable, 4 matches

Friday, 22 May 2026 (1 paper)

[132] doi:10.3892/ijmm.2026.5865 [paper, data]

Endothelial NOX4‑driven oxidative stress inhibition reverses HtrA1 deficiency‑induced blood‑brain barrier disruption and cognitive impairment.

Journal: International journal of molecular medicine

Status: data only, 1 dataset cited

Thursday, 21 May 2026 (2 papers)

[133] doi:10.1038/s43856-026-01670-y [paper]

Region-specific vulnerability to vascular risk factors and modifiable protective influences on white matter hyperintensities.

Journal: Communications medicine

Status: code on request

[134] doi:10.1186/s13041-026-01312-3 [paper, data]

Sevoflurane ameliorates cerebral ischemia-reperfusion injury by modulating mitochondrial dynamics and attenuating apoptosis via Shh-YAP1 signaling pathway.

Journal: Molecular brain

Status: data only, 1 dataset cited

Wednesday, 20 May 2026 (2 papers)

[135] doi:10.1186/s13195-026-02074-9 [paper]

Metabolic parameter variability, brain structure, perfusion, and cognition: a population-based study.

Journal: Alzheimer's research & therapy

Status: code on request

[136] doi:10.1371/journal.pone.0334571 [paper, data]

Spinal mechanisms and feasibility of Dry Needling versus Botulinum Toxin Type A in post-stroke lower limb spasticity: A proof-of-concept randomized clinical trial protocol (STROKE-POC).

Journal: PloS one

Status: data only, 1 dataset cited

Tuesday, 19 May 2026 (1 paper)

[137] doi:10.1038/s41598-026-47967-9 [paper, data]

Interaction between systemic arterial reservoir behavior and cerebrovascular vasoreactivity during acute controlled hypocapnia.

Journal: Scientific reports

Status: data only, 1 dataset cited

Sunday, 17 May 2026 (2 papers)

[138] doi:10.1002/ana.78251 [paper]

Continuous Versus Short EEG After Ischemic Stroke: What cEEG Adds for Detecting Abnormalities and Predicting Post-Stroke Epilepsy.

Journal: Annals of neurology

Status: code on request

[139] Code ↔ Paper doi:10.64898/2026.05.13.26353120 [paper, repository]

WITHDRAWN: Can glucagon like peptide-1 receptor agonists be beneficial for brain health?

Journal: medRxiv (preprint)

Authors' code: MetRXlab/spectra (no license)

Status: code verified, 8 files readable, 3 matches

Friday, 15 May 2026 (1 paper)

[140] Code ↔ Paper doi:10.64898/2026.05.12.26353056 [paper, repository]

Neuroimaging and behavioural biomarkers of post-stroke cognitive recovery outcomes

Journal: medRxiv (preprint)

Authors' code: OSF 9zkyh (no license)

Status: code verified, 7 files readable

Thursday, 14 May 2026 (4 papers)

[141] Code ↔ Paper doi:10.2463/mrms.mp.2024-0149 [paper, repository]

Image Distortion Correction for Diffusion MR Imaging Using a Transformer-based U-Net.

Journal: Magnetic resonance in medical sciences : MRMS : an official journal of Japan Society of Magnetic Resonance in Medicine

Authors' code: MASILab/Synb0-DISCO (no license), junyuchen245/transmorph_transformer_for_medical_image_registration (MIT)

Status: code verified, 387 files readable, 6 matches

[142] doi:10.1111/pcn.70075 [paper, data]

Network-level disconnectivity tracks poststroke depressive symptom improvement.

Journal: Psychiatry and clinical neurosciences

Status: data only, 1 dataset cited

[143] Code ↔ Paper doi:10.1007/s10571-026-01743-5 [paper, repository]

Adapted Smart-seq3xpress Facilitates Selective Microglial Transcriptomic Profiling From Frozen Brain Tissue.

Journal: Cellular and molecular neurobiology

Authors' code: GliaOmicsLab/microglia-sc-snRNAseq (no license)

Status: code verified, 18 files readable, 19 matches

[144] Code ↔ Paper doi:10.1016/j.stemcr.2026.102922 [paper, repository]

Spatially resolved transcriptomics identifies intercellular signaling post-ischemic stroke that controls neural stem cell proliferation.

Journal: Stem cell reports

Authors' code: jinworks/CellChat (GPL-3.0)

Status: code verified, 23 files readable, 2 matches

Wednesday, 13 May 2026 (1 paper)

[145] Code ↔ Paper doi:10.3389/fnut.2026.1837406 [paper, repository]

MIND diet moderates the associations between cerebrovascular and neurodegenerative disease burden and cognition.

Journal: Frontiers in nutrition

Authors' code: desdemps/VioScreen-MIND-scoring-R (no license)

Status: code verified, 3 files readable, 2 matches

Tuesday, 12 May 2026 (1 paper)

[146] doi:10.1016/j.redox.2026.104210 [paper, data]

Vespakinin-M delineates an AMPK/mTOR-arginine-TCA cycle axis to act as an immunometabolic switch in post-stroke microglia.

Journal: Redox biology

Status: data only, 1 dataset cited

Monday, 11 May 2026 (3 papers)

[147] doi:10.1038/s41598-026-51942-9 [paper, data]

Quantum SVM-driven framework for accurate brain stroke classification.

Journal: Scientific reports

Status: data only, 1 dataset cited

[148] doi:10.1186/s12974-026-03847-7 [paper, data]

IFI204 drives gasdermin D-mediated mitochondrial permeabilization to amplify neuronal pyroptosis in ischemic stroke.

Journal: Journal of neuroinflammation

Status: data only, 1 dataset cited

[149] Code ↔ Paper doi:10.1016/j.nicl.2026.104001 [paper, repository]

Effect of vascular lesion preprocessing on Brain Intensity AbNormality Classification Algorithm (BIANCA) white matter hyperintensity segmentation.

Journal: NeuroImage. Clinical

Authors' code: mendeltem/Bianca_Evaluation (no license)

Status: code verified, 35 files readable, 28 matches

Sunday, 10 May 2026 (2 papers)

[150] Code ↔ Paper doi:10.1038/s41746-026-02708-0 [paper, repository]

Multi-dimensional MRI representation and privileged learning approaches to functional outcome prediction for ischemic stroke patients.

Journal: NPJ digital medicine

Authors' code: kayvanlabs/ischemic_stroke_mrs_prediction (no license)

Status: code verified, 3 files readable, 1 match

[151] doi:10.1002/mrm.70429 [paper]

Ultrafast fMRI Detects Age-Related Changes in Harmonics of Cardiac Pulsations in the Brain at 7 T.

Journal: Magnetic resonance in medicine

Status: code on request

Friday, 8 May 2026 (1 paper)

[152] doi:10.1161/strokeaha.125.054736 [paper, data]

Longitudinal Degeneration of Microstructural and Structural Connectivity Patterns Following Stroke.

Journal: Stroke

Status: data only, 1 dataset cited

Thursday, 7 May 2026 (3 papers)

[153] doi:10.1212/wnl.0000000000218031 [paper]

Acute Kidney Injury and Risk of Adverse Neurocognitive Outcomes: A Systematic Review and Meta-Analysis.

Journal: Neurology

Status: code on request

[154] doi:10.1186/s13195-026-02018-3 [paper, data]

Impact of Apolipoprotein E4 on blood-brain barrier integrity in target replacement murine models: a systematic review and meta-analysis.

Journal: Alzheimer's research & therapy

Status: code on request, 1 dataset cited

[155] Code ↔ Paper doi:10.3389/fimmu.2026.1790415 [paper, repository]

Machine learning-based identification of concomitant stroke and prognostic analysis in patients with Guillain-Barré syndrome: a retrospective study.

Journal: Frontiers in immunology

Authors' code: gbs-concomitant-stroke-assessment-7uybrpemwruzc6xlzn4vsg.streamlit.app (no license)

Status: code verified

Wednesday, 6 May 2026 (2 papers)

[156] Code ↔ Paper doi:10.1038/s41598-026-44365-z [paper, repository]

Foot-ground force quantifies impaired balance control mechanisms post-stroke.

Journal: Scientific reports

Authors' code: rikasd/zIP_poststroke (no license), Zenodo 19682467 (CC-BY-4.0)

Status: code verified, 44 files readable, 15 matches

[157] doi:10.1155/humu/2963117 [paper, data]

Construction of a Diagnostic Model and Drug Prediction for Postischemic Stroke Cognitive Impairment Based on Machine Learning Screening of Lactate Metabolism- and Pyroptosis-Related Genes.

Journal: Human mutation

Status: data only, 1 dataset cited

Monday, 4 May 2026 (2 papers)

[158] doi:10.1038/s41598-026-51310-7 [paper, data]

BTK promotes neuroinflammation after intracerebral hemorrhage involving hub genes and alterations in microglial functions.

Journal: Scientific reports

Status: data only, 1 dataset cited

[159] doi:10.1016/j.jlr.2026.101053 [paper]

HIV-1 Tat-induced VAPB disruption initiates a cascade of organellar failures culminating in neuronal lipid accumulation.

Journal: Journal of lipid research

Status: code on request

Saturday, 2 May 2026 (1 paper)

[160] doi:10.1016/j.lanepe.2026.101693 [paper, data]

Absolute risk of acquired brain injury and rehabilitation needs in Denmark, 2014-2023: a population-based prospective cohort study.

Journal: The Lancet regional health. Europe

Status: data only, 1 dataset cited

Friday, 1 May 2026 (6 papers)

[161] doi:10.1002/jev2.70295 [paper, data]

RVG-Modified BMSCs-Derived Small Extracellular Vesicles Loaded With miR-21 Alleviate Neuronal Injury Resulted From Excessive Autophagy via Targeting PTEN/Akt/mTOR Pathway After Cerebral Ischaemia.

Journal: Journal of extracellular vesicles

Status: data only, 1 dataset cited

[162] Code ↔ Paper doi:10.1111/ejn.70528 [paper, repository]

Dorsal Posterior Parietal Cortex Lesions Disrupt Spatial- but Not Motor-Based Inhibition.

Journal: The European journal of neuroscience

Authors' code: OSF bnh9e (no license)

Status: code verified, 15 files readable, 5 matches

[163] doi:10.1097/md.0000000000048634 [paper, data]

Identifying therapeutic target genes for stroke through systematic druggable Mendelian randomization analysis.

Journal: Medicine

Status: data only, 1 dataset cited

[164] doi:10.1002/jnr.70130 [paper, data]

Pantothenic Acid Protects Neurons After Ischemic Stroke by Targeting ID3 to Restore Action Potential Amplitude.

Journal: Journal of neuroscience research

Status: data only, 1 dataset cited

[165] Code ↔ Paper doi:10.3389/fnagi.2026.1789408 [paper, repository]

Biological brain aging, cognitive-motor decline and vascular risk: a multivariate imaging analysis of 40,579 individuals.

Journal: Frontiers in aging neuroscience

Authors' code: rmarkello/pyls (GPL-2.0)

Status: code verified, 34 files readable, 3 matches

[166] doi:10.1002/brb3.71502 [paper]

Post-Stroke Depression Is Associated With Shared Neurodevelopmental Risk and Circuit Disruption.

Journal: Brain and behavior

Status: code on request

Wednesday, 29 April 2026 (1 paper)

[167] doi:10.1016/j.nicl.2026.103999 [paper, data]

Beyond the cerebral cortex: cerebellar language-related subregions contributions to fluency in post-stroke aphasia.

Journal: NeuroImage. Clinical

Status: data only, 1 dataset cited

Tuesday, 28 April 2026 (2 papers)

[168] Code ↔ Paper doi:10.1007/s12975-026-01413-0 [paper, repository]

Quantitative EEG in post-stroke delirium: Spectral and Functional Connectivity Analyses in a Case-Control Study.

Journal: Translational stroke research

Authors' code: CornelisStam/BrainWave (no license)

Status: empty repository, 1 file readable

[169] doi:10.3389/fmed.2025.1702025 [paper, data]

Diagnostic value of gut microbiota profiling and circulating biomarkers to predict post-stroke infection in acute ischemic stroke.

Journal: Frontiers in medicine

Status: data only, 1 dataset cited

Monday, 27 April 2026 (5 papers)

[170] doi:10.1136/svn-2025-004248 [paper]

Brain-targeted extracellular vesicles for anti-cuproptosis therapy in subarachnoid haemorrhage.

Journal: Stroke and vascular neurology

Status: data only

[171] Code ↔ Paper doi:10.1371/journal.pcbi.1013113 [paper, repository]

Systems biology analysis of vasodynamics in mouse cerebral arterioles during resting state and functional hyperemia.

Journal: PLoS computational biology

Authors' code: hesfandi/Mouse-cerebral-Arteriolar-vasodynamics_Model (no license)

Status: code verified, 42 files readable

[172] doi:10.1097/cm9.0000000000004019 [paper, data]

Transcranial photobiomodulation mitigates neuroinflammation by suppressing the activation of neurotoxic microglia through inhibition of the cGAS-STING pathway following intracerebral hemorrhage in mice.

Journal: Chinese medical journal

Status: data only, 1 dataset cited

[173] doi:10.1186/s12866-026-05084-7 [paper, data]

Multi-omics profiling of gut microbiota and host transcriptome identifies diagnostic signatures and mechanistic links in moyamoya disease.

Journal: BMC microbiology

Status: data only, 1 dataset cited

[174] doi:10.1080/07853890.2026.2663133 [paper, data]

Glimepiride alleviates blood-brain barrier disruption and neuroinflammation in mice with intracerebral haemorrhage.

Journal: Annals of medicine

Status: data only, 1 dataset cited

Thursday, 23 April 2026 (1 paper)

[175] doi:10.3389/fimmu.2026.1801746 [paper, data]

<i>Laminaria japonica</i> polysaccharide mitigates acute neuroinflammation in cerebral ischemia-reperfusion injury through Csf3-modulated pathways.

Journal: Frontiers in immunology

Status: data only, 1 dataset cited

Wednesday, 22 April 2026 (1 paper)

[176] Code ↔ Paper doi:10.1523/jneurosci.0019-26.2026 [paper, repository]

Endothelial <i>Adgrl2</i> Expression and Alternative Splicing Controls the Cerebrovasculature.

Journal: The Journal of neuroscience : the official journal of the Society for Neuroscience

Authors' code: Zenodo 15802164 (CC-BY-4.0), AllenCellModeling/aicsimageio (BSD-3-Clause), shapely/shapely (BSD-3-Clause), Zenodo 15802163 (CC-BY-4.0)

Status: code verified, 306 files readable, 2 matches

Monday, 20 April 2026 (3 papers)

[177] doi:10.1161/jaha.125.046208 [paper, data]

Integration of Genome-Wide Association Studies With Single-Cell and Bulk Expression Quantitative Trait Locus to Identify Stroke Susceptibility Genes.

Journal: Journal of the American Heart Association

Status: data only, 1 dataset cited

[178] Code ↔ Paper doi:10.1038/s43587-026-01106-1 [paper, repository]

Repurposing drugs for the prevention of vascular dementia using evidence from drug target Mendelian randomization.

Journal: Nature aging

Authors' code: Zenodo 15190762 (MIT), victoriatb/vad_dtmr2025 (MIT)

Status: code verified, 14 files readable, 4 matches

[179] doi:10.1186/s13054-026-06030-9 [paper]

Autoregulation-guided intracranial pressure and cerebral perfusion pressure targets in different subtypes and characteristics of traumatic brain injury.

Journal: Critical care (London, England)

Status: code on request

Friday, 17 April 2026 (3 papers)

[180] doi:10.1038/s41598-026-47122-4 [paper, data]

How covariate control can bias our insights into brain architecture and pathology.

Journal: Scientific reports

Status: data only, 1 dataset cited

[181] doi:10.3390/jcm15083085 [paper, data]

Non-Invasive Electrotherapy in the Rehabilitation of Motor Sequelae and Spasticity Following Stroke: A Systematic Review.

Journal: Journal of clinical medicine

Status: data only, 1 dataset cited

[182] doi:10.1016/j.isci.2026.115779 [paper]

Propranolol alleviates cerebral infarction through the β2-AR-mediated ERK/NLRP3 pathway.

Journal: iScience

Status: code on request

Thursday, 16 April 2026 (3 papers)

[183] doi:10.1007/s10571-026-01710-0 [paper, data]

The Role and Diagnostic Efficacy of the METTL14/GADD45B m<sup>6</sup>A Methylation/BDNF Regulatory Axis in Acute Ischemic Stroke.

Journal: Cellular and molecular neurobiology

Status: data only, 1 dataset cited

[184] Code ↔ Paper doi:10.1186/s12938-026-01555-0 [paper, repository]

Incorporating normal periventricular changes for enhanced pathological white matter hyperintensity segmentation: on multiclass deep learning approaches.

Journal: Biomedical engineering online

Authors' code: Mahdi-Bashiri/wmh-normal-abnormal-segmentation (MIT)

Status: code verified, 12 files readable, 17 matches

[185] doi:10.1117/1.jbo.31.4.047001 [paper]

Noninvasive diffuse optical monitoring of cerebral blood flow and oxygenation responses to intermittent hypoxia in neonatal rats.

Journal: Journal of biomedical optics

Status: code on request

Wednesday, 15 April 2026 (6 papers)

[186] Code ↔ Paper doi:10.1523/jneurosci.0729-25.2026 [paper, repository]

Human Cerebral Blood Flow Activity with Diurnal Variation Differentially Correlated with the Suprachiasmatic Nucleus.

Journal: The Journal of neuroscience : the official journal of the Society for Neuroscience

Authors' code: doi:10.5061/dryad.hx3ffbgtn (no license)

Status: code verified

[187] doi:10.1159/000551193 [paper, data]

Intracranial Arterial Calcification on Computed Tomography and Risk of Cognitive Impairment or Dementia: A Systematic Review and Meta-Analysis.

Journal: Cerebrovascular diseases (Basel, Switzerland)

Status: data only, 1 dataset cited

[188] Code ↔ Paper doi:10.1038/s41598-026-48421-6 [paper, repository]

Deep learning for early detection of cerebral small vessel disease using self-supervised graph embeddings and retinal image analysis.

Journal: Scientific reports

Authors' code: Nandhiniphd07/RNVT (GPL-3.0)

Status: code verified, 3 files readable, 2 matches

[189] Code ↔ Paper doi:10.1038/s41598-026-47814-x [paper, repository]

Predicting post-stroke functional outcome using explainable machine learning and integrated data.

Journal: Scientific reports

Authors' code: jespeols/predicting_mRS_xML_integrated_data (MIT)

Status: code verified, 10 files readable, 8 matches

[190] doi:10.1117/1.nph.13.2.025007 [paper]

Inducing and monitoring photothrombotic stroke in anesthetic neuroprotection-free mice using functional photoacoustic microscopy.

Journal: Neurophotonics

Status: code on request

[191] doi:10.1093/braincomms/fcag133 [paper]

White matter hyperintensities, retinal vascular calibre and changes in age-related hearing loss.

Journal: Brain communications

Status: code on request

Tuesday, 14 April 2026 (1 paper)

[192] doi:10.1186/s12974-026-03809-z [paper, data]

Ependymal cell inflammatory activation in response to intracerebral hemorrhage.

Journal: Journal of neuroinflammation

Status: data only, 1 dataset cited

Monday, 13 April 2026 (2 papers)

[193] doi:10.1038/s41467-026-71746-9 [paper, data]

Double-helix optical point spread function enables real-time mesoscopic 3D functional microangiography in the living mouse brain and skull.

Journal: Nature communications

Status: code on request, 1 dataset cited

[194] Code ↔ Paper doi:10.1186/s13024-026-00942-4 [paper, repository]

Regional diffusion imaging measures to disentangle SVD-related hypertensive arteriopathy versus cerebral amyloid angiopathy.

Journal: Molecular neurodegeneration

Authors' code: psmd-marker.com (no license)

Status: code verified

Thursday, 9 April 2026 (1 paper)

[195] doi:10.1186/s12974-026-03794-3 [paper, data]

Single-cell omics and flow cytometry identify distinct immune states of dural and brain-infiltrating IL-17-producing γδ T cells after experimental stroke.

Journal: Journal of neuroinflammation

Status: data only, 5 datasets cited

Wednesday, 8 April 2026 (1 paper)

[196] doi:10.3389/fnmol.2026.1750882 [paper, data]

Exploring the molecular mechanism of dexmedetomidine in alleviating blood-brain barrier disruption in rats with cerebral ischemia reperfusion injury based on network pharmacology.

Journal: Frontiers in molecular neuroscience

Status: data only, 1 dataset cited

Monday, 6 April 2026 (1 paper)

[197] doi:10.1007/s10565-026-10177-0 [paper]

Multi-omics analysis and experimental validation reveal the IRF7-CXCL10 axis as a master regulator of microglial PCD in ischemic stroke.

Journal: Cell biology and toxicology

Status: data only

Friday, 3 April 2026 (2 papers)

[198] Code ↔ Paper doi:10.1038/s43856-026-01555-0 [paper, repository]

Mechanistically driven transnidal hemodynamic manipulations enhance simulated endovascular transvenous treatments for brain AVMs.

Journal: Communications medicine

Authors' code: kellenvu/massoud-avm (no license)

Status: code verified, 2 files readable, 5 matches

[199] Code ↔ Paper doi:10.1126/sciadv.aeb1134 [paper, repository]

Selective vulnerability of cerebral vasculature to <i>NOTCH3</i> variants in small vessel disease and rescue by phosphodiesterase-5 inhibitor.

Journal: Science advances

Authors' code: zhaoaite/ActinDetection (MIT), doi:10.5061/dryad.2280gb66p (no license)

Status: code verified, 5 files readable, 2 matches

Thursday, 2 April 2026 (2 papers)

[200] doi:10.1155/humu/4033506 [paper, data]

SELL Marks an Effector-Deficient CD8<sup>+</sup> T Cell Subset That Promotes Intracerebral Hemorrhage and Responds to Rutin Therapy.

Journal: Human mutation

Status: data only, 1 dataset cited

[201] doi:10.1093/braincomms/fcag117 [paper, data]

Connectome disruptions after hypoxic-ischaemic injury associate with consciousness disorder severity.

Journal: Brain communications

Status: data only, 1 dataset cited

Wednesday, 1 April 2026 (5 papers)

[202] doi:10.1186/s12866-026-05013-8 [paper, data]

Cold environment is associated with worse outcomes in ischemic stroke patients and the underlying gut microbial mechanism.

Journal: BMC microbiology

Status: data only, 1 dataset cited

[203] Code ↔ Paper doi:10.1002/mp.70419 [paper, repository]

Comparing deep learning stroke segmentation in NCCT, CTA, and CTP: Accuracy, domain transfer, and temporal sampling effect.

Journal: Medical physics

Authors' code: ac74esiw/stroke_segmentation (no license)

Status: code verified, 2 files readable, 1 match

[204] doi:10.1111/jnc.70430 [paper]

Peri-Microvascular Glycogen and Lactate Regulate Capillary Constrictions and Ischemia Outcome in Mice.

Journal: Journal of neurochemistry

Status: code on request

[205] Code ↔ Paper doi:10.1093/cercor/bhag040 [paper, repository]

BOLD response delays represent local cortical processing.

Journal: Cerebral cortex (New York, N.Y. : 1991)

Authors' code: kendrickkay.net/glmdenoise (no license), proulx-s/hrdelay (CC-BY-4.0), Zenodo 6568435 (CC-BY-4.0)

Status: code verified, 84 files readable, 3 matches

[206] doi:10.1002/alz.71433 [paper, data]

Genetic correlation analysis of Alzheimer's disease and stroke implicates PHLPP1 as a shared locus in individuals of African ancestry.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Status: data only, 1 dataset cited